Comments (4)
Hi Maithy,
the ...
in the Pattern column of the example specification file is just be a placeholder,
columns that are missing in your data must not be declared in the specification file, which throws an error.
The file Pel_Amica_Example.txt contains 48 Intensity columns, but only 47 are declared in amica_expt.txt
.
The 2nd sample in Pel_Amica_Example.txt M08_R1_Pel
is missing in amica_expt.txt
, amica fails to succesfully assign all samples to groups.
I've added the sample M08_R1_Pel
to the group R1_Pel
at the 2nd position of the file design.txt
(hope that is correct).
design.txt
And I've attached you an appropriate specfication
file.
specification.txt
Then it should work.
Best,
Sebastian
from amica.
Hi Sebastian,
M08 was a mistake in the example file.
Thanks for the specification.txt
When I upload the example file it works fine but when I upload the full file it says no data uploaded again.
Thanks
Maithy
from amica.
I will try a different file and let you know later.
from amica.
Hi Sebastian,
I think there was some problem with the previous dataset I was using. It works now.
Thanks for the great app
Maithy
from amica.
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