talmolab Goto Github PK

a-soid

An active learning platform for expert-guided, data efficient discovery of behavior.

acme

A library of reinforcement learning components and agents

berrigan_et_al_sleap-roots

Code for figures and analyses in Berrigan et al.

brax-rodent-run

Brax Rodent Run training script

cajal2024-tutorial-data

Data for CAJAL 2024 QABVR tutorial

campy

Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.

conda_packages

cosyne-tutorial-data

Cosyne 2024 SLEAP tutorial data.

cosyne_vm

This repository stores the scripts that are locally available on every VM instance we spin up for the COSYNE 2024 conference.

dm_control

DeepMind's software stack for physics-based simulation and Reinforcement Learning environments, using MuJoCo.

domain_rep

Git repo for project studying the effects of image statistics on unsupervised models of the visual stream

dreem

DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.

internal-dockerfiles

dockerfiles for talmo

keiller-tutorial-data

Data for Keiller Academy tutorial.

keypoint-moseq

lab-website

Website for Talmo Pereira's lab (https://talmolab.org)

miniscope-daq-qt-software

Software for streaming and controlling neural and behavioral data from freely behaving animals

mmtracking

OpenMMLab Video Perception Toolbox. It supports Video Object Detection (VID), Multiple Object Tracking (MOT), Single Object Tracking (SOT), Video Instance Segmentation (VIS) with a unified framework.

motionmapperpy

Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)

movenet-dance-demo

A real-time demo running on webcam feed that guides subject to move to match pre-defined target poses.

multi-animal-dannce

ndx-pose

NWB extension to store pose estimation data

ndx-pose-training

NWB extension to store pose estimation and pose estimator training data

pose-viewer-pilot

pyhsmm-autoregressive

autoregressive plugin

sleap

A deep learning framework for multi-animal pose tracking.

sleap-anipose

SLEAP to Anipose triangulation pipeline for 3D multi-animal pose tracking.

sleap-crowdsourcing

Web development project that allows users to annotate images in a browser.

sleap-datasets

Sample datasets for SLEAP

sleap-deps

Packages necessary for sleap build maintained by the SLEAP team.