syntheticgio Goto Github PK

anki-ipa

Anki add-on to insert IPA transcriptions

bco_specification

Repository for support of the IEEE 2791-2020 standard. Please see our home page for communications/publications:

bco_wgs_varscan_analysis

Biocompute object that covers the paper "". A biocompute object contains the metadata related to the workflow used to generate there results of a paper or other research.

biomapper2

Updated version of biomapper to include various improvements. This is a direct replacement and is referenced internally as biomapper.

biomuta_docker_image

Docker image containing BioMuta Cancer Data

chromosome

Chromosome radial display. Shows size of chromosomes, level of variations and individual SNPs.

circlemud

Unofficial mirror of the CircleMUD engine.

clparser

A C++ Command Line Parser

dbsnp-overlapper

Easily compare your csv data (regions) and get overlap with dbSNP.

epub_text_mine

A helper script to mine text from epub books.

fda-hive

FDA High-performance Integrated Virtual Environment (HIVE)

gdc_downloader

Docker file setting up a GDC container that can accept a manifest and download data from GDC.

gpt-2-simple

Python package to easily retrain OpenAI's GPT-2 text-generating model on new texts

gts-mapping

libbcrypt

A c++ wrapper around bcrypt password hashing

obsidian-clarifai-plugin

Plugin for Obsidian that helps you generate content using the Clarifai platform. This includes both text and image content.

spdlog

Fast C++ logging library.

sqlitecpp

SQLiteC++ (SQLiteCpp) is a smart and easy to use C++ SQLite3 wrapper.

survival-analysis-tcga

syntheticgio.github.io

Splash Page for JackFrost2199's projects

synthomic

tcga_varscan_pipeline

Support files to run TCGA's varscan pipeline on Google compute engine.

tcga_wgs_data_paper

Code and scripts which support a paper related to whole genome sequence variant calls for normal-tumor paired samples in the TCGA project.

tissue_slide_downloader

Code to convert SVS files into JPEG and upload to Clarifai for CV purposes.

vcf_window_tracker

watermarker

HTML/JavaScript/CSS software that can generate watermarks for synthetic genomics.

wgs_to_vcf