sverchkov Goto Github PK

argon2

R bindings for the argon2 secure password hashing algorithm.

baselineregularization

Implementation of Baseline Regularization by Zhaobin et al. (KDD 2017) targeted to work with OMOP databases

bionet-simulator-haskell

Simulates a biological network, written in Haskell.

bionetwork

R Project for Macine Learning of Biological Interaction Networks

bmi-773-content

Some content for BMI 773 at UW-Madison

bn-visualization

A Bayesian network visualization project in Java using Processing.

carpentries-py-rswd

cdm-data

Tools and information for working with data in CDM format

collatz-explorer

Visually explore Collatz sequences

communityinference

R package implementing common community inference algorithms for weighted graphs

csnem

Context-Specific Nested Effects Models, a network inference method for high-throughput knockout screens.

dbplyr

Database (DBI) backend for dplyr

docker-cytoscape-desktop

emma

A webapp for Exploring MetaMap Annotations of medical text

flagellar-growth-model

A model of flagellar growth, initial work by Yuriy Sverchkov and Muruhan Rathinam, 2007

gams-exercises-sverchkov

Trying out GAMS

generalizedtrees

Library for tree models: decision trees, model trees, mimic models, etc.

gnimark

Automatically exported from code.google.com/p/gnimark

h3k-subnetwork-inference

Subnetwork inference for H3K

high-dim-data-lesson

interpretable-models

ivancic-panel-selection

Code used in the statistical analysis for "Blood serum protein biomarkers for the screening of non-metastatic colorectal carcinomas" by Melanie Ivancic et al.

java-bn-library

A minimal Bayesian Network library in java

mc-em-cs-nem

metabolite-and-protein-network-from-knockouts

Theory and code for learning a metabolite and protein network from knockdown data

metasra-pipeline

MetaSRA: normalized sample-specific metadata for the Sequence Read Archive

misc-stat-tools

Statistical tools in Python that weren't available in the usual places.

mitomics-follow-ups

Extended analyses of the MITOMICS data post-publication

ml-x-nexus

nem

This was forked from the read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/nem.html Contributions: http://www.bioconductor.org.