Name: Yu Sun
Type: User
Company: University of Rochester | Biogen
Bio: Ph.D. in Bioinformatics and Genomics
University of Rochester | Biogen
Location: Cambridge, MA, USA
Blog: https://scholar.google.com/citations?user=Uulg4aUAAAAJ&hl=en
Yu Sun's Projects
A set of scripts related to bed12 (or bed3, bed4) data processing
An R package for RNAseq differential expression analysis and visualization, in an easy and reproducible way.
A collection of scripts for FASTA file processing
Enhanced version of the FastQTL QTL mapper
A web server to predict the next word
A collection of scripts for our PacBio paper
A pipeline for Qiime2 metagenomics analysis
A comprehensive pipeline for Ribo-seq data analysis
A comprehensive pipeline for RNAseq data analysis
A comprehensive pipeline for small RNAseq data analysis
A classifier for biological and non-biological relevant piRNA-mRNA pairing, based on experimental data.
A step-by-step 10-day Python3 tutorial designed for bioinformatician
Mining of Ribo-seq data: Translation efficiency (TE) and FLOSS score calculation
A reproducibility study of a single cell dataset