Comments (2)
Good suggestion. I'm putting it on my todo list for the next release. Will keep you updated.
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Hi plijnzaad,
A new release of Arriba is available. The workflow is now simpler (and faster). extract_read-through_fusions
is obsolete and no read_through_fusions.bam
file is generated anymore. Therefore, there is no need to add a @PG
header anymore.
Regards,
Sebastian
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Related Issues (20)
- Suppressed Sequences included in RefSeq_viral_genomes_v2.4.0.fa.gz HOT 1
- Adding more tools to plot. HOT 1
- Error in merging adjacent breakpoints? HOT 2
- Known canonical fusion reported with zero reads - need help to understand the output HOT 1
- Finding fusions and counting supporting reads zsh: killed HOT 3
- Finding fusions and counting supporting reads zsh: killed HOT 17
- Single-End vs Paired-End behaviour for split1/2, discordant and coverage counts HOT 14
- Problem detection exom skipped HOT 2
- Issue with Dragen BAM encountering std::out_of_range error in version [v2.4.0] HOT 8
- Error occured while I running draw_fusion.R HOT 2
- Error while running draw_fusion.R HOT 8
- Issues with Missing Exon Coordinates Using "draw_fusions.R" HOT 1
- Criteria of selecting specific transcripts HOT 5
- Identifying gene fusions in plant genomes. HOT 3
- The interpretation of the contents of the result file fusions.tsv. HOT 2
- Arriba and STARfuison align HOT 7
- Fusion transcript mismatch between the same breakpoints HOT 2
- custom gtf file HOT 7
- Output fasta for TPM counting HOT 4
- Multimapper filter vs malformed SAM records - how many alignments is "too many"? HOT 11
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