Comments (2)
The genome generation step of STAR requires 30-40 GB of RAM. Does your machine have sufficient memory? If you can rule out that this is the issue, can you send me the log files of STAR?
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Oh yes so definitely that's the problem, thanks!
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Related Issues (20)
- Feature request: Compatibility with Starlong HOT 12
- Arriba output filtering HOT 5
- Reference Genome HOT 2
- Using a genome not supported HOT 3
- zsh: exec format error: ./arriba HOT 5
- Is it possible to have draw_fusions.R output the exon number in text? HOT 4
- Suppressed Sequences included in RefSeq_viral_genomes_v2.4.0.fa.gz HOT 1
- Adding more tools to plot. HOT 1
- Error in merging adjacent breakpoints? HOT 2
- Known canonical fusion reported with zero reads - need help to understand the output HOT 1
- Finding fusions and counting supporting reads zsh: killed HOT 3
- Finding fusions and counting supporting reads zsh: killed HOT 17
- Single-End vs Paired-End behaviour for split1/2, discordant and coverage counts HOT 14
- Problem detection exom skipped HOT 2
- Issue with Dragen BAM encountering std::out_of_range error in version [v2.4.0] HOT 8
- Error occured while I running draw_fusion.R HOT 2
- Error while running draw_fusion.R HOT 8
- Issues with Missing Exon Coordinates Using "draw_fusions.R" HOT 1
- Criteria of selecting specific transcripts HOT 5
- Identifying gene fusions in plant genomes. HOT 3
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