Comments (1)
What do you mean by divergence time if the three individuals are from one species? Are they from different subpopulations?
The recent high Ne can be an artifact. I would try running with merged time segments in the recent past. You can also try msmc2, which is more stable in the boundaries of the inference time window.
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Related Issues (20)
- AssertError bootstrap HOT 2
- another Segmentation Fault HOT 1
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- decode time units HOT 3
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