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chris-nemeth avatar chris-nemeth commented on September 28, 2024

Hi,

You're right that at the moment we don't support this. I've created a branch called "noise" which allows each observation to have it's own error. When using the optimize! function to estimate the parameters you'll need to set noise=true to estimate these parameters. I'm not sure how well this will work with so many noise parameters, you may end up overfitting the model.

Good luck!

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JonnyCBB avatar JonnyCBB commented on September 28, 2024

Thanks for getting back to me. Really appreciate it. In my case the observation errors are given and hence I don't need to optimize these parameters. I've never implemented GPR so I could be wrong but my understanding from reading this paper was that you could specify the observation noise for each observation and keep those as specified and only optimize the hyperparameters. Is this the case or have I interpreted the method incorrectly?

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chris-nemeth avatar chris-nemeth commented on September 28, 2024

It's great that the errors are known and don't need to be estimated. Using the "noise" branch, by default the optimize! function will estimate only the mean and kernel hyperparamters and leave the noise parameters untouched. See "regression_1d.jl" in the docs folder.

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JonnyCBB avatar JonnyCBB commented on September 28, 2024

Fantastic. Thank you

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