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Alex Stivala's Projects

alaam_sampling icon alaam_sampling

Scripts for Using sampled network data with the Autologistic Actor Attribute Model

alaamee icon alaamee

Autologistic Actor Attribute Model (ALAAM) parameter estimation, simulation, and goodness-of-fit

axelrod_ultrametric icon axelrod_ultrametric

Ultrametric distribution of culture vectors in an extended Axelrod model of cultural dissemination

bionetworks_estimations icon bionetworks_estimations

Data and scripts for "Testing biological network motif significance with exponential random graph models"

cergm icon cergm

R-package for Citation Exponential Random Graph Models (cERGM)

cuda_satabsearch icon cuda_satabsearch

Fast and accurate protein substructure searching with simulated annealing and GPUs

estimnetdirected icon estimnetdirected

Equilibrium Expectation for ERGM parameter estimation for large networks

geodesic_cycles icon geodesic_cycles

Code, scripts, and data for "Geodesic cycle length distributions in delusional and other social networks"

gpu_hashtables icon gpu_hashtables

Lock-free Concurrent Hash Tables and Parallel Dynamic Programming on the GPU

network_times icon network_times

Python code for computing time distribution of arcs closing open two-paths into transitive or cyclic triads

qptabsearch icon qptabsearch

Tableau-based protein substructure search using quadratic programming

waffles icon waffles

A toolkit of machine learning algorithms.

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