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acnutrients

coral_disease_resistance_microbiome

Analysis for the microbiomes of corals that were tested for disease resilience and susceptibility in nursery-reared Caribbean Acropora spp. Diseased coral were grafted onto healthy fragments and diseased fragments may have harbored distinct pathogens.

coralpersistence

larvae_sediment

q2-scnic

A QIIME2 plugin for running SCNIC

resistada_microbiome

sctld_16s_2019

Microbiome analysis to compare corals affected by Stony Coral Tissue Loss Disease (SCTLD) and apparently healthy corals, and the microbiome analysis of sediment and seawater samples collected before, during, and after SCTLD's arrival at a reef.

sctld_microbiome_meta_analysis

The goal of this study is to conduct a meta-analysis of publicly available and unpublished SCLTD microbiome datasets. In doing this we aim to: (1) Characterize the microbiome of SCTLD across region, species, year, and studies. (2) Identify drivers leading to variation among datasets.