sroitman Goto Github PK

coral_multidisease_microbiome

All code associated with and analyses performed for: Roitman, S. and Closek, C.J., Pollock, F.J., Jordán-Dahlgren, E., Brandt, M.E., and Medina, M. A comparative microbiome and transcriptome approach for multidisease analysis in Caribbean corals. (in preparation)

onchocerca_biomarker_discovery

psu_stat555_atac-seq_rna-seq

reef_environment_metagenomes

All code associated with and analyses performed for: Roitman, S., López-Londoño, T., Shantz, A., Iglesias-Prieto, R., Leventhal, G., Medina, M. Metagenomic analysis of environmental samples from an anthropogenically impacted reef. (in preparation)

tick-microbiome-roitman-et-al

All code associated with and analyses performed for a tick microbiome project (Roitman et al., in prep)

varadero_coral_microbiome

All code and analyses performed for: Roitman, S., López-Londoño, T., Joseph Pollock, F. et al. Surviving marginalized reefs: assessing the implications of the microbiome on coral physiology and survivorship. Coral Reefs 39, 795–807 (2020).