srhilz Goto Github PK
Name: Stephanie Hilz
Type: User
Company: UCSF
Bio: Postdoctoral fellow working in cancer genomics at @UCSF-Costello-Lab
Stephanie Hilz's Projects
2016targetinganalysis
Used to perform targeting analysis for "Transcriptome profiling of the developing male germ line identifies the miR‑29 family as a global regulator during meiosis" by Stephanie Hilz, Elizabeth A. Fogarty, Andrew J. Modzelewski, Paula E. Cohen and Andrew Grimson.
2018-03-10-ucsf-r
2019-03-08-ucsf-python
swc at ucsf on 3/8/2019
2019-09-27-ucsf-python
UCSF SWC 2019/09/27 Python
3dgliomaanalysis
All tidy data, analyses, and output for Hilz et al. 3D Glioma Atlas manuscript.
3dgliomaatlas
advimgmetricssurvival
costello-pscn-seq
exomeadvancedvariantfiltering
A post-mutation calling pipeline for additional variant filtering.
exomequalityplots
Scripts to generate plots of exome library and mutation calling quality stats.
facets
Scripts to run FACETS (https://github.com/mskcc/facets) on Costello lab exome data.
gliomaatlas3d
A Shiny web app for visualizing genomic data from brain tumors in 3D.
mirsift
Sifting through high-throughput sequencing data to identify miRNAs with a regulatory impact.
modofkerinf_rnaseqanalysis
Differential expression analysis for a study investigating the modulation of inflammation in keratinocytes
planets
sco
seqanalysiscode
workshop-template
Rendering of the workshop-template site
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