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arts

ecology-duvauchelle

Analysis of community and population ecology in a seagrass bed in Duvauchelle

file_manipulation

A directory containing programs that manipulate files (primarily fasta files)

fsthet_analysis

simulate populations to test lositan

gwsca_simulation_model

gwscar

This repository contains an R package with a number of population genomics tools, including a wrapper that will run an Fst-based genome-wide selection components analysis

literature-review

A program to parse results downloaded from the Web of Science and output those results as a table.

manuscriptpackage

Template for writing manuscripts as an R package

parentage_review

popgen

Analyzing RAD seq population genetics data

rnaseq_analysis

This repository contains custom programs and scripts used in molecular evolution analyses of RNA-seq datasets

sca

genome-wide selection components analysis

spftools

Useful functions

stacks_processing

The programs contained here are designed to help process the output from Stacks for population genomics work.