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academic-file-converter

📚 Import Bibtex publications and Jupyter Notebook blog posts into your Markdown website or book. 将Bibtex转换为Markdown网站

autolfads

Generalized modeling of single-trial neural population dynamics.

autolfads-tf2

A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.

computationthrudynamicsbenchmark

demos

Various utility scripts and demo notebooks

dpca

An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)

expressive-latent-dynamics-paper

Code to reproduce experiments from Sedler, A, Versteeg, C, Pandarinath, C. "Expressive architectures enhance interpretability of dynamics-based neural population models". Neurons, Behavior, Data analysis, and Theory 2023.

falcon

gcp-tutorial-pack

lfads-cd

Implementation of latent factor analysis via dynamical systems (LFADS) model with coordinated dropout (CD) and sample validation (SV)

lfads-run-manager

Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)

lfads-tutorial

lfads_tf1

The Tensorflow 1.15 version of LFADS

musim

class for motor unit simulations, produce firing rates according to force profiles, operates on size principle

neural-data-transformers

rat-loco

Functions for rat locomotion data processing and analysis

rodent-behavior-analysis

Code for analyzing rodent behavioral data

sbtt-demo

A toy example demonstrating selective backpropagation through time (SBTT).

snel-scpu-analysis

Repo to house code for SNEL analysis of NIH Spinal Circuits and Plasticity Unit data

stabilizedbci

Companion code for the paper: "Stabilization of a brain-computer interface via the alignment of low-dimensional spaces of neural activity"