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Name: Simon Lee

Type: User

Company: UCLA

Bio: Side Quest Master

Twitter: SimonLee79475

Location: California

Blog: https://simonlee-a.github.io/

Welcome to Simon Lee's Github Repository

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Stats

My Affiliations and Work

Current (2023): Ph.D. Student at UCLA
- Advisor: Jeffrey Chiang
- Working on Developing methods in Representation Learning using Multimodal data
  - Project 1: Multimodal Embedding Model for EHR (MEME) | code | paper |
    - Subproject 1: Do LLMs understand Medical Codes | code | paper |
    - Subproject 2: Neural ODEs as Textual Solvers | code | [paper]
    - Subproject 3: Synthetic Data Generation via Agents | code | [paper]
    - Subproject 4: The Foundations of Text Serialization | code | [paper]
  - Project 2: Distribution Shift | code | paper |
  - Project 3: TBD | code | paper |
  - Project 4: TBD | code | paper |
Former (2023): Data Scientist at Celsius Therapeutics
- Manager: Mukund Varma (Senior Machine Learning Scientist)
- Working on Bulk Deconvolution & Quanitfying cell types from histology images using computer vision
Former (2022): Visiting Student at École Polytechnique Fédérale de Lausanne
Former (2022): Computational Researcher for QCBio, UCLA
- Mentors: Dr. Jeffrey Chiang & Dr. Akos Rudas
- Worked on ABP Imputer Model that predicts future blood pressure

Simon Lee's Projects

abp_imputation-with-ehr

ABP Imputation with EHR medication data is the second version of the ABP Imputer model.

anime-recommendations

A mini project done on recommendation systems. We utilized the BERT transformer model and cosine similarity to make our recommendations.

biobank-bind-lora

Fine-tuning "ImageBind One Embedding Space to Bind Them All" with LoRA

bulk-deconvolution

Cellular Deconvolution Benchmarking Package. Includes plotting features, easy to load training and deconvolution functions, and a lot of documentation

celltype_classification

BIO 322 Cell Prediction project. By Simon Lee and Léa Goffinet

deep-learning

A repository dedicated to deep learning. Working with PyTorch on a Mac, so no GPU access

epfl

A repository of different projects/assignments done at EPFL

find_my_bread

My first indie platformer game. The concept is a french man looking for his bread.

gerrymandering-polarisation-study

An analysis conducted on Gerrymandering & Polarisation

lost-self-game

Lost: an indie RPG game by Simon Lee

mamba

medmultimodal

meme

Multiple Embedding Model for EHR (MEME) used for strong prediction on Emergency Department tasks

neural-ordinary-differential-equations

Repository to study Neural ODE's

neurips-mia-2021

https://openproblems.bio/#about

simonlee711

Config files for my GitHub profile.

simonlee711.github.io

Simon's Personal Website

ucla-grad-courses

Graduate Courses taken at UCLA

youtube-the-mirror-society

ada-2022-project-chromegoldfish created by GitHub Classroom

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