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airflow

Apache Airflow - A platform to programmatically author, schedule, and monitor workflows

airflow-chart

A Helm chart to install Apache Airflow on Kubernetes

airflow-dags-examples

bacgwasim

A Simulator for Bacterial Machine learning and Genome-Wide Association Studies

bioconda-recipes

Conda recipes for the bioconda channel.

bool

crafting_interpreters

deepripe

gatk-sv

A structural variation pipeline for short-read sequencing

mixem

Pythonic Expectation-Maximization (EM) implementation for fitting mixtures of probability densities

omniclip

omniCLIP is a CLIP-Seq peak caller. This is a fork from the main project.

omniclip-workflow

This workflow performs CLIP peak calling using omniCLIP.

sequencetubemap

displays multiple genomic sequences in the form of a tube map

shields

Concise, consistent, and legible badges in SVG and raster format

snakemake

This is the development home of the workflow management system Snakemake. For general information, see

splitstrains

staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

statannotations

add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

test

tll

A tiny little language

wdl

Rust crates for working with Workflow Description Language (WDL) documents.