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bioinf_docker

cel-seq-pipeline

ci-test

cloud-pipeline-spark-build

Spark distrubution for the EPAM/cloud-pipeline

cloud-pipeline2

Cloud agnostic genomics analysis, scientific computation and storage platform

cromwell

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

cromwell-monitor

Generate stats for Cromwell task calls including resource utilization & estimated costs

deb-s3

Easily create and manage an APT repository on S3

deeplasmid

diffdock

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

gpustat

📊 A simple command-line utility for querying and monitoring GPU status

gpustat-web

👓 A web interface of gpustat: monitor GPU clusters at a look

hive

Mirror of Apache Hive

jupyter-file-downloader

jupyterlab-desktop

JupyterLab desktop application, based on Electron.

localpilot

luigi

Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.

ngb

New Genome Browser (NGB) - a Web - based NGS data viewer with unique Structural Variations (SVs) visualization capabilities, high performance, scalability, and cloud data support

ngb-qa

autotest for NGB UI

ngb2

ngx_http_proxy_connect_module

A forward proxy module for CONNECT request handling

ntlmaps

NTLM Authorization Proxy Server

pipeline-builder

Pipeline Builder is a JavaScript library for visualizing and constructing bioinformatics workflows, using Workflow Description Language (WDL)

projects-tests

rocker-versioned

Run current & prior versions of R using docker

sagemaker-custom-project-templates

saml-idp

Simple SAML Identity Provider (IdP) for Node

simple-health-monitor

uspnet

Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model

vaexprs