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  • šŸ‘‹ Hi, Iā€™m @shadarf
  • šŸ‘€ Iā€™m interested in Bioinformatics and DeepLearning for Biological Data.
  • šŸŒ± Iā€™m currently learning NGCNN.
  • šŸ’žļø Iā€™m looking to collaborate on MSI-CNN projects.
  • šŸ“« How to reach me [email protected]

shadarf's Projects

aperio_2_qupath icon aperio_2_qupath

Aperio ImageScope H&E annotations to QuPath Converter GUI implementation.

bioc2015oles icon bioc2015oles

R package for the "Basics of image data and spatial patterns analysis in R" Bioc 2015 workshop

dna_codons_py icon dna_codons_py

A simple code to split DNA into codon list using two methods: 1) with a for loop, 2) with list comprehension.

qupath2aperio icon qupath2aperio

this converts GeoJSON annotations to Aperio ImageScope XML annotations with all headers and ending encoded.

shadarf icon shadarf

Config files for my GitHub profile.

shap-hypetune icon shap-hypetune

A python package for simultaneous Hyperparameters Tuning and Features Selection for Gradient Boosting Models.

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