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Samuel Galvão Elias

Where to find me

         

Who am I?

Biosoftware Developer, I am interested in develop and improve bioinformatic and general purpose software to solve biological problems.

See Lepista Bioinformatics as principal repo!

See my personal repo:

trophies

  • 🔭 I’m currently working on Biotrop Biological Solutions
  • 🌱 I’m currently learning
  • 💬 Ask me about Softwares for Genomics, Metagenomics, Mycology, Microbiology
  • ⚡ Fun fact: I am a official botanist. Be patient!

Samuel G. Elias's Projects

abiorganizer icon abiorganizer

Extract and distribute ab1 files from Sanger DNA sequencing to folders of their respective owners.

aws-codepipeline-s3-codedeploy-linux icon aws-codepipeline-s3-codedeploy-linux

Use this sample when creating a simple pipeline in AWS CodePipeline while following the Simple Pipeline Walkthrough tutorial. http://docs.aws.amazon.com/codepipeline/latest/userguide/getting-started-w.html

bioinformatic-pipelines icon bioinformatic-pipelines

Include common methods in bioinformatics, including genome assembly (with and without reference genomes), and RNAseq processing.

classeq-frontend icon classeq-frontend

The classeq frontend project based on Vibe template. Written in React framework.

classeq2 icon classeq2

The improved implementation of the Classeq (in Rust)

csv2fas icon csv2fas

Parse CSV files containing fasta components to a true fasta file.

gb2csv icon gb2csv

Parse a Genbank Flatfile to a CSV file.

hivemind icon hivemind

Decentralized deep learning framework in pytorch. Built to train models on thousands of volunteers across the world.

lepiota icon lepiota

Contain the basic infrastructure to compose the Classeq-backend including Postgres, Neo4J, and Redis databases and the Django-based SSO.

mypy icon mypy

Optional static typing for Python 3 and 2 (PEP 484)

stomata icon stomata

A simple Rust application middleware.

the-measure-project icon the-measure-project

A simple and intuitive interface to perform biological measures on browser and generate basic statistics.

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