serdar- Goto Github PK

atom-language-gams

An implementation of the GAMS modelling language for atom.io

book

A Primer in Data Analysis Using Python

clamshell.jl

cobrapy

COBRApy is a package for constraint-based modeling of biological networks

computational-statistics-with-python

Resources for STA 633 class

coupled-oscillator-system

Parameter estimation for Kuramoto model of metabolic and cell cycle oscillators

docker-opal

docker-rock

Rock R server in a Docker container

dyngenie3

Semi-parametric approach for the inference of gene regulatory networks from time series of expression data

ecopy

Python tools for ecological data analyses

fable-p5-gibber-demo

Use fable to make music with p5 and gibber

gdx-pandas

Python interface to read and write GAMS GDX files using pandas.DataFrames as the intermediate data format.

gibbs-energy-dissipation-limited-flux-balance-analysis

Code to perform flux balance analysis with a limited Gibbs energy dissipation rate using the combined thermodynamic and stoichiometric models of E. coli and S. cerevisiae

janm

janm is a Normal Mode Analysis Library for Java

jmat

Clone of JMAT library (https://sourceforge.net/projects/jmat/)

jucsbi.jl

Computational Structural Biology Library for Julia

juliadoc

jupygams

A Python package to run GAMS scripts in Jupyter notebook

mektuplar

metabolism

Course material for Metabolism (WPLS18013)

ml-workspace

🛠 All-in-one web-based IDE specialized for machine learning and data science.

navprot_web

phenotypedatabase-rclient

R client to connect to GSCF

serdar

snippets

spotted

a simple Android app for taking pictures and uploading them to a server (tested on Samsung S3 Mini Cyanogenmod 12)

sta-663-2020

targets

xalign

Xalign is a multiple structural (cross) alignment tool