sen1019san Goto Github PK

ads1-notebooks

Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing

appls

Applied Python Programming for Life Scientists

asynt

Genome alignment and synteny plots

awesome

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.

bioinfo_scripts

Misc scripts than can be useful for bioinformatics

coder2gwy

互联网首份程序员考公指南，由3位已经进入体制内的前大厂程序员联合献上。

corvid_svpopgen

coursera-ml-andrewng-notes

吴恩达老师的机器学习课程个人笔记

d2l-zh

《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被全球140所大学采用教学。

dna-seq-analysis

DNA sequencing analysis notes from Ming Tang

fantastic-matplotlib

flexidot

Highly customizable, ambiguity-aware dotplots for visual sequence analyses

genomic_tools

Genomic related tools

graph-genomics-review

Pangenome graphs (review article on graph-based pangenomic methods)

gssplayground

Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature

hands-on-ml-zh

:book: [译] Sklearn 与 TensorFlow 机器学习实用指南【版权问题，网站已下线！！】

hapi

Chromosome-length haplotype inference using genotype data of single gamete cells

hpp_year1_variant_calling

isoseq-pipeline

pipeline for working with PacBio long read RNA data using the outputs of isoseq3

joyful-pandas

Pandas中文教程

learn-bioinformatics

lihang-code

《统计学习方法》的代码实现

ml-notes

notes about machine learning

ngs_data_processing

Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.

pgc

Population genetic analysis of SVs in Chinese (PGC)

pgv

Reference-agnostic Representation and Visualization of Pan-genomes

plantsandpython

Course material for the Foundation in Computational Plant Science course at Michigan State University

polyacaller

popgen-notes

Population genetics notes

population-structural-var-calling-smoove

population structural variant calling with smoove