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Hi šŸ‘‹

I am Seb, Principal Data Scientist @ INSiGENe.

I am a seasoned data scientist and šŸ§¬šŸ’» computational biologist šŸ’»šŸ§¬, bringing over a decade of expertise in software development, data analysis, and technical leadership. Specializing in bioinformatics and data science, I am used to analyzing large omics datasets, prioritizing reproducibility and extracting meaningful insights through the utilization of appropriate tools āš™ļøšŸ“šŸ”Ø and methodologies such as e.g. statistics, predictive models and machine learning šŸ¤–. As I aim to contribute to meaningful discoveries, I strives to remain at the forefront of innovation in all things technology and data!

  • āœšŸ» I am blogging at https://www.linkedin.com/company/89821603
  • šŸ”­ Iā€™m currently working on a RAG Chatbot for augmenting the interpretation of computational biology analyses in the context of the scientific literature
  • šŸ’¬ Ask me about all things R, bioinformatics and shiny app development



Hobbeist's GitHub stats

Seb Rauschert's Projects

bandageng icon bandageng

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

cookiecutter icon cookiecutter

A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.

dadasnake icon dadasnake

Amplicon sequencing workflow heavily using DADA2 and implemented in snakemake

dnasmoker icon dnasmoker

A R package to create a score for in utero exposure to maternal smoking, based on whole blood DNA methylation.

dot-files icon dot-files

dot-files selectively copied from Harry R. Schwartz (hrs/dotfiles), Howard Abrams (howardabrams/dot-files) etc..

kmer icon kmer

K-mer Counting for Biological Sequence Analysis

llm-rag icon llm-rag

This repo demonstrates the development of Retrieval Augmented Generation (RAG).

pagoda2 icon pagoda2

R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets

ranacapa icon ranacapa

R package for downstream analysis for anacapa eDNA pipeline

ranger icon ranger

A Fast Implementation of Random Forests

rulefit icon rulefit

Python implementation of the rulefit algorithm

rworkshop icon rworkshop

Resources for the Telethon Kids 2 day introduction to R workshop

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