Comments (1)
Handled, might want to skip it on the future, but failing "just in case" right now.
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Related Issues (20)
- Transfer QC data to Status DB automatically HOT 1
- casava bcl_to_fastq should handle missing indexes HOT 1
- sample-specific genome build info is not used HOT 1
- add genome for rat HOT 1
- statusdb upload in casava
- snpEff output for all samples in a project
- statusdb object equalities
- bam file header info in rerun lanes
- bcbio.distributed.tasks.py only imports from it's containing directory HOT 2
- illumina_finished_msg.py reruns generate empty _fastq.gz files and overwrite md5sums HOT 3
- calculation of ti/tv ratios on a case by case basis HOT 1
- Beginner manual HOT 12
- Typo in nextgen/README
- Occasional zipimport.ZipImportError: bad local file header in bcbio_nextgen-0.3a-py2.7.egg HOT 1
- Backwards incompatibility in BWA HOT 6
- The compression functionality skip some files
- Illumina_finished_message.py crashes in merge_demux_results if files not present. HOT 1
- Undemultiplexed metric file corrupted
- Demultiplexing mixed length dual index runs HOT 1
- Single sample on lane - wrong read count HOT 1
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