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Welcome! šŸ‘‹

My name is Sophie Breitbart. šŸ‘©ā€šŸ¦° I'm a PhD candidate at the University of Toronto in the Department of Ecology & Evolutionary Biology.

  • šŸ”­ Iā€™m currently working on: Understanding how urbanization influences the ecology and evolution of common milkweed (a favorite of Monarch butterflies).
  • šŸŒ± Iā€™m currently learning: New skills left and right! My thesis has allowed me to cultivate skills in field research, statistics and modelling, teaching, writing, data analysis, bioinformatics and genomics, storytelling through presentations and other formats, molecular analyses, and so much more. I owe a lot to my excellent advisors, Drs. Marc Johnson and Helene Wagner.
  • šŸ”Ž Iā€™m looking for help with: Understanding potential academic-adjacent or non-academic career paths for someone who loves doing research in ecology/evolutionary biology- especially the data collection and analysis portions. Please get in touch if you have gone down a similar career path. I'd be grateful to connect and learn about your experiences!
  • šŸ“« How to reach me: https://sbreitbart.github.io/.
  • šŸ˜„ Pronouns: She/her/hers
  • āš” Fun fact: Khruangbin and La Luz are some of my favorite code-along musicians.

Sophie Breitbart's Projects

bgss_retreat_2021_workshop icon bgss_retreat_2021_workshop

A workshop for EEB graduate students on how to write your own functions with a sprinkle of tips & tricks for writing and managing excellent code!

cv icon cv

I am using Steven V. Miller's CV template, available here, as the basis for my CV: https://github.com/svmiller/svm-r-markdown-templates. Thank you Steve!

datasci_for_ecologists icon datasci_for_ecologists

Page for Workshop, "An Ecologist's Introduction to Data Science", presented at ESA/CSEE 2022 and for SORTEE

gbs-preprocess icon gbs-preprocess

Scripts to pre-process Genotyping-by-Sequencing data (GBS) before analysis with STACKS.

inat_automatic icon inat_automatic

Converting my first iNaturalist dashboard into an automatically-updating version

observ_study_phenotype icon observ_study_phenotype

"Urbanization and a green corridor influence reproductive success and pollinators of common milkweed" Project code

scrape_hp icon scrape_hp

Creating a weekly link roundup from a defunct blog with web scraping

svm-r-markdown-templates icon svm-r-markdown-templates

I have a suite of R Markdown templates for academic manuscripts, beamer presentations, and syllabi. I share them here.

urban_genetic_divergence icon urban_genetic_divergence

"Urbanization and a green corridor do not impact genetic divergence in common milkweed (Asclepias syriaca)" project code

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