Comments (2)
Hi,
The "seurat5" branch for signac no longer exists and all of the applicable updates have been merged into the master
branch. The master
branch of Azimuth is also up to date. Thus, you should just install with the default settings for both packages.
remotes::install_github('satijalab/azimuth', ref = 'master')
remotes::install_github('stuart-lab/signac', ref = 'master') # or you can install directly from CRAN
from azimuth.
from azimuth.
Related Issues (20)
- ConvertEnsembleToSymbol HOT 2
- Is there a way to find out which reference genes drive the cell type prediction score? HOT 1
- Error when using the web app for PBMC annotation HOT 5
- AzimuthReference error: refAssay (SCT) should contain a single SCT model
- AzimuthReference fails when metadata field contains empty factor levels
- Docker image tag says "v0.5.0" but sessionInfo() inside the container returns "Azimuth_0.4.6" HOT 1
- Azimuth and integrated data HOT 1
- RunAzimuth ATAC working for BMMC but not for PBMC atlas
- Error Installing Azimuth
- Reproducibility HOT 2
- LoadH5ADobs Missing Labels
- object 'mtx.shape' not found ERROR Azimuth web app HOT 2
- Getting error in RunAzimuth function with "bonemarrowref" reference on Seurat object
- RunAzimuth offline with homolog.table path reference HOT 3
- Bug in `AzimuthReference` HOT 1
- `fv.size() != vector_size`
- Azimuth installation problem HOT 2
- Gene ID conversions
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from azimuth.