sanchestm Goto Github PK

arduino-geofencing

Geofencing project with Arduino, the Adafruit Fona 808 and Adafruit IO

coviewer

Sars-CoV-2 viewer and analyzer for small datasets

coyote-sim

population simulations to access the genetic variability decline of coyotes in california due to isolation caused by roads

dh-latin-america-court-cases-analysis

analysis of cases from ONU's Inter-American Court of Human Rights

edna-particle-modeling

Model for eDNA particle distribution using budget equation

edna-pipump

code to remotely control pump to colect eDNA

edna-protocol-optimization

pipelines and data for publication "Optimizing an eDNA protocol for monitoring endangered Chinook Salmon in the San Francisco Estuary: balancing sensitivity, cost and time. "

edna_protocol_optimization

from paper: Optimizing an eDNA protocol for monitoring endangered Chinook Salmon in the San Francisco Estuary: balancing sensitivity, cost and time.

ednash-website

eDNAsh website version

ednashboardopen

free dashboard for eDNA studies

fastq-hashvectorizer

fly-larvae-quantitative-genetics

genome-dimensionality-reduction-comparison

comparison of Dim reduction methods for snp data

genome-vis

gm-mosquito-sim

Spatio temporal model for dispersion of transgenic mosquitos

gwas-pipeline

python implemetation of GWAS pipeline

khmer

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

mitotic-index-calc

easy to use software for calculating the mitotix index of a cell culture image

rapid-cell-counter

PyQT graphical interface for high throuput cell counting for research

regex-genome-tokenizer

package to tokenize fasta and fastq files and transform them to pandas dataframe. Also possible to export fasta files as sparse matrices

sacramento-perch-microsatelite-anaysis

spectrex360-screen-rotation-ubuntu

code for auto rotating HP Spectre x360 screen and pen input

stock-dataminer

get quotes from stocks (yahoo finance) to python pandas table

tf-binding-fruitfly-lottlab

tsne-vs-pca-heritage-data

wolf-moose-simulator