saintxugang Goto Github PK

5years

annoprobe

beginning-perl-for-bioinformatics

Beginning Perl for Bioinformatics · 生物信息学 Perl 语言入门（中文版）

bioinfor

bioinformatics123

bpscrnaseq

cnv

ervcaller

ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposable elements (TEs) in the human genome using next-generation sequencing (NGS) data. We evaluated the tools using both simulated and real benchmark whole-genome sequencing (WGS) datasets. ERVcaller is capable to accurately detect various TE insertions of any lengths, particularly ERVs. It allows for the use of a TE reference library regardless of sequence complexity, such as the entire RepBase database. It is easy to install and use with command lines.

ervmap

ERVmap is one part curated database of human proviral ERV loci and one part a stringent algorithm to determine which ERVs are transcribed in their RNA seq data.

geo

geomirror

gse76275-tnbc

gse76275-tnbc-1

helixlife-wgcna-2018

helixlife-WGCNA-2018 https://github.com/xndless/helixlife-WGCNA-2018.git

humanid

my first R package just for testing

idmap1

idmap2

idmap3

metabric

methy_array

methylseq-analysis

mouse-xx-xy-c1

my_wgcna

myscrna-seq

ngs-analysis

二代测序数据分析

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

python-100-day

学习 Python 100 天系列文章代码

python-examples

Python技术 公众号文章代码实例

quant-genetics-webinars

Quantitative Genetics Tools for Mapping Trait Variation to Mechanisms, Therapeutics, and Interventions - Webinar Series

r-chip-data-analysis