sagesteppe Goto Github PK

aim_field

tools for UFO terrestrial AIM

aim_interpretation

References, and code backgrounds for interpreting 5 year AIM monitoring summaries.

aimnalysis

Functions for Assessment, Inventory, and Analysis field work, yearly reporting, and analysis of a panel.

analytical_toolkit_sdm

This repository contains the data, functions, scripts, and presentation for the guest lecture in the Analytical Toolbox Class at Northwestern University 2022.

augspurger_synchrony

A single function to calculate Augspurgers index of synchrony after Primack 1980

augspurgerindex

Calculate Augspurgers Index of Synchrony

barneby_lives_dev

Tools for collecting digital data on herbarium specimens

barnebylives

Tools for collecting digital data on herbarium specimens.

clm_2024_veg_ecology

Code for presentation, data analysis, and visualization for afternoon Vegetation Ecology session for 2024 CLM interns.

cs_08

R4DS NU 2022!

ecologicalsitedescriptionnetwork

This small repository (with a BIT of manual digitization :-/ ) allows one to create groups of 'similar' ESD's using network theory and community detection

ecoloradense

Analysis for assessing whether this taxon merits continued taxonomic recognition

empiricalseedzones

An attempt to consolidate the existing Western Empirical Seedzones and standardize them.

field2lab

pollipal and genomics starting to live here

floragunnisonriverbasin

An attempt to generate a floristic inventory of the entire Gunnison River Basin in Western Colorado.

floristic-provinces-of-the-north-american-holarctic

These data were created by grafting several existing shapefiles, and creating new ones in QGIS to fill in the voids. These data have an estimated accuracy of +/- 20 km. Given the fuzziness of a region I consider this acceptable for all pedagolical purposes, and most academic. Clearly points near the boundaries of these should be evaluated per user discretion. The author is very open to collaboration and updates of this product!!!

getgridmet

download gridmet data to a computer near you

getgridmet-dev

download gridmet data to a computer near you. an HJL x RCB co(de)llab

manuscript

Writing my masters thesis for submission to Methods in Ecology and Evolution

metagenomics_pipeline

This is meant to serve as a consensus repository to detail the entire process of implementing A353 metabarcoding

nest-cells-leaves-id

scripts for leaf measurements and original field and herbarium.

nothingbutnet

Helper functions for creating more informative, and visually appealing, circular networks using iGraph. These functions wrap up into a single big function for drawing many networks to arrange in a grid.

phycharts

Create a phylogenetically informed pie chart to display relationships within a sampling schema

qgis_lesson

This repository contains contents for teaching SoS crews how to set up and interact with the open source, lightweight, and efficient geographic information system (GIS) QGIS.

r4ds_nu

if you are TA'ing this class all Case Study solutions (in many many ways!) are in here. email me for acess

revisionary_taxonomy

project proposal for revisionary taxonomy of Western Colorado endemics

rmbl_pollen_clustr

This is the script Woodworth and Benkendorf score and generate clusters for pollen morphotypes

rmbl_site_map

Creating sf maps for ecology papers

sagesteppe.github.io

Reed Benkendorfs research website

sdms_rmbl