ryankim3gilead Goto Github PK

local-llms-analyse-finance

In this project, I explored how local LLMs can be used to label data and support analyses. Specifically, I used Llama2 model to automatically categorise my bank transaction data.

macos-enterprise-privileges

For Mac users in an Enterprise environment, this app gives the User control over administration of their machine by elevating their level of access to Administrator privileges on macOS. Users can set the time frame using Preferences to perform specific tasks such as install or remove an application.

mcpcounter

methylseq

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

mit-deep-learning-book-pdf

MIT Deep Learning Book in PDF format (complete and parts) by Ian Goodfellow, Yoshua Bengio and Aaron Courville

ml-notebooks

:fire: A series of code examples for all sorts of machine learning tasks and applications.

mlmax

Example templates for the delivery of custom ML solutions to production so you can get started quickly without having to make too many design choices.

mogonet

MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in biomedical applications.

mountpoint-s3

A simple, high-throughput file client for mounting an Amazon S3 bucket as a local file system.

move

MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

msisensor-pro

Microsatellite Instability (MSI) detection using high-throughput sequencing data.

multi-modal-transformer

The repository collects many various multi-modal transformer architectures, including image transformer, video transformer, image-language transformer, video-language transformer and self-supervised learning models. Additionally, it also collects many useful tutorials and tools in these related domains.

multifish

EASI-FISH analysis pipeline for spatial transcriptomics

musicatk

Mutational Signature Comprehensive Analysis Toolkit

mutscape

Ａ user-friendly Python toolkit, which provides a comprehensive pipeline to easily explore the cohort-based mutational characterization for studying cancer genomics.

nash-rna-seq-cell-reports-medicine

NASH RNA-seq Cell Reports Medicine

neoadjuvant-therapy-response-predictor

nextflow-infra

AWS CloudFormation templates for deploying Nextflow infrastructure

nf-dragen

POC Nextflow pipeline to run Illumina DRAGEN software

nf-modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

nf-prov

nf-sentieon

POC Nextflow pipeline to run Sentieon software

nf-vif

A Nextflow-based Virus Insertion Finder

nftest

nichenetr

NicheNet: predict active ligand-target links between interacting cells

nn-svg

Publication-ready NN-architecture schematics.

nuclearsegmentationpipeline

oncotree

open-data-registry

A registry of publicly available datasets on AWS