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rvarki's Projects

3duf icon 3duf

Interactive microfluidic design editor

batchqc icon batchqc

Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.

csvtomd icon csvtomd

📝📊 Convert your CSV files into Markdown tables.

dhruv-rlz icon dhruv-rlz

A Compresion tool that compresses a sequence file using a reference file.

gen-4_ess icon gen-4_ess

Code base for GUI and Spectrometer control for ESS system BMO Lab Boston University

markdown_readme icon markdown_readme

Markdown - you can mark up titles, lists, tables, etc., in a much cleaner, readable and accurate way if you do it with HTML.

metascope icon metascope

An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)

pathoscope icon pathoscope

Pathoscope: Species identification and strain attribution with unassembled sequencing data

rbowtie2 icon rbowtie2

Bioconductor package: an R wrapper for Bowtie2 and AdapterRemoval

recursive-repair_tests icon recursive-repair_tests

The Snakemake experiment files used to run the Recursive Repair and BigRePair tests on HiperGator

rlz icon rlz

RLZ - compress sequence files using a reference file

shapedslp icon shapedslp

SLP encodings that support substring extraction

sux icon sux

Succinct data structures in C/C++

ufsl icon ufsl

Union file system locker allows users to store files and transfer files from one computer to another

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