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Ruan Yang's Projects

awesome icon awesome

😎 Awesome lists about all kinds of interesting topics

awesome-datascience icon awesome-datascience

:memo: An awesome Data Science repository to learn and apply for real world problems.

caj2pdf_gui icon caj2pdf_gui

caj2pdf gui程序: 转换**知网 CAJ 格式文献为 PDF。佛系转换,成功与否,皆是玄学。

chemical_vae icon chemical_vae

Code for 10.1021/acscentsci.7b00572, now running on Keras 2.0 and Tensorflow

deepmd-kit icon deepmd-kit

A deep learning package for many-body potential energy representation and molecular dynamics

dl-qa icon dl-qa

利用深度学习算法学习QA系统

docsentimentanalysis icon docsentimentanalysis

Syntax and Ruler-Based Doc sentiment analysis 基于依存句法规则的篇章级情感分析demo

gromacs-free-energy-calculation icon gromacs-free-energy-calculation

This repository contained python code used to do organic free energy calculation. Reference: http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/free_energy/index.html; https://github.com/ruanyangry/gromacs-lammps-process-simulation.

gromacs-lammps-process-simulation icon gromacs-lammps-process-simulation

This repository contained python code used to do gromacs and lammps molecular dynamics simulation. Process to generate topology files compatible with AMBER force field (GAFF). Automatically generate simulation control files for gromacs and lammps.

handson-ml icon handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

hanlp icon hanlp

自然语言处理 中文分词 词性标注 命名实体识别 依存句法分析 关键词提取 新词发现 短语提取 自动摘要 文本分类 拼音简繁

kmclib icon kmclib

A kinetic Monte Carlo Python/C++ library.

lammps-data icon lammps-data

Using single molecule data file build bulk system data file. Inspired by gromcas .itp file and .top. If you are good at using gromcs and you want to use the lammps software for a special function simulation.This code can conveniently obtain the configuration file of the bulk phase topology.

lammps_interface icon lammps_interface

automatic generation of LAMMPS input files for molecular dynamics simulations of MOFs

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