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lenachenpumc avatar lenachenpumc commented on September 15, 2024

I had similar problems downloading microarray data. I downloaded the files from AHBA website and then unzipped the files into one specify file. I run "files = abagen.fetch_microarray(donors=['9861', '10021', '12876', '14380', '15496', '15697'], data_dir='xxx') "(XXX refers to the document address).
Hope this can help you.

from abagen.

liuzhenqi77 avatar liuzhenqi77 commented on September 15, 2024

Thanks for reporting the issue. We have received issues like this before but we haven't been able to reproduce it reliably. It might be related to network connection stability. In this case, we recommend downloading the files from ahba website directly and place them in the corresponding directory. Meanwhile, please feel free to provide more details to help debug this issue. Thank you!

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