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100-days-of-ml-code

100-Days-Of-ML-Code中文版

athena_meta

read cloud assembler

awesome-bioinformatics-workflow-chinese

Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目

beautiful-visualization-with-r

《R语言数据可视化之美》配套代码

bioawk

BWK awk modified for biological data

biocode

Bioinformatics code libraries and scripts

cheatsheets

RStudio Cheat Sheets

checkm

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

co-occurrence

R scripts for performing co-occurrence analyses

code-prettify

An embeddable script that makes source-code snippets in HTML prettier.

community-assembly-processes-and-species-coexistences-of-agricultural-soils-microbiome

comp-genomics-class

Code and examples for JHU Computational Genomics class

data-analysis-for-life-sciences

R learning

data.table

R's data.table package extends data.frame:

easyaovwlxplot

easy aov and wlx and plot R. diferential analysis

esl-cn

The Elements of Statistical Learning (ESL)的中文翻译、代码实现及其习题解答。

geo

ggstatsplot

Enhancing `ggplot2` plots with statistical analysis 📊🎨📣

humanid

my first R package just for testing

illumina-utils

A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

in-depth-ngs-data-analysis-course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

kraken

Kraken taxonomic sequence classification system

learn-bioinformatics

let-it-bin

Optimize workflow for binning metagenomic short reads from multiple samples

linux-command

Linux命令大全搜索工具，内容包含Linux命令手册、详解、学习、搜集。https://git.io/linux

machinelearning

My blogs and code for machine learning. http://cnblogs.com/pinard

mdm

Workflow and package for network approach to study the role of microbial dark matter (MDM)

metagenome

Metagenome analysis pipeline

metagenomics_workflows

Workflows for metagenomic sequence data processing and analysis.

metapgn

A pipeline for construction and graphical visualization of annotated pangenome networks.