rhagenson Goto Github PK

2019-01-03-uno

Data Carpentry Genomics Workshop at the Univeristy of Nebraksa Omaha - January 3-4, 2019

allourideas.org

allourideas allows groups to collect and priorize information in an open, democratic, and efficient process.

awesome-cv

:page_facing_up: Awesome CV is LaTeX template for your outstanding job application

awesome-pony

Curated resources on the pony language

bio-tool-requests

Requests for Bioinformatics tools people want, but nobody has built

biogo

biogo is a bioinformatics library for Go

biological-calculus

A Manubot continuous publishing (CP) article on biological calculus

biological-messaging

A Manubot continuous publishing (CP) article on biological messaging passing

butte

BoUnds of Time Till Expansion, a computational framework to investigate the SCNA arrival time in the somatic evolution toward the most recent common ancestor of tumor sample(s)

deconstructsigs

deconstructSigs

demixer

Collection of methods to demix Illumina read data

dhall-lang

Maintainable configuration files

facets

Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.

git-novice

Software Carpentry introduction to Git for novices.

hg-novice

Software Carpentry introduction to Mercurial for novices.

idris2

A purely functional programming language with first class types

idris2-tutorial

irfinder

Detecting intron retention from RNA-Seq experiments

khmer

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

library-scaffolding-generator

Scaffolding generator for starting Pony libraries

long-read-proteogenomics

A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.

main.actor-package-markdown

Generated markdown documentation for packages hosted on https://main.actor

mrbayes

MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:

ms-thesis

mumdex

MUMdex source code for genome analysis

muscle

A copy of Robert C. Edgar's MUSCLE aligner

ne_ncov_rapid

nextflow-gotchas

A collection of unexpected challenges and learnings with nextflow and nf-core.

nf-core_configs

Config files used to define parameters specific to compute environments at different Institutions

polar-bookshelf

Polar is a personal knowledge repository for PDF and web content supporting incremental reading and document annotation.