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  • ๐Ÿ‘‹ Hi, Iโ€™m @realyuyangyang
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YuYangyang's Projects

2019_strunz icon 2019_strunz

Reproducibility repo accompanying Angelidis et al. "Longitudinal single cell transcriptomics reveals Krt8+ alveolar epithelial progenitors in lung regeneration"

annotated_deep_learning_paper_implementations icon annotated_deep_learning_paper_implementations

๐Ÿง‘โ€๐Ÿซ 60 Implementations/tutorials of deep learning papers with side-by-side notes ๐Ÿ“; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), ๐ŸŽฎ reinforcement learning (ppo, dqn), capsnet, distillation, ... ๐Ÿง 

apayng icon apayng

Anatomy pics are all you need on Gadgetron

awesome-bioinformatics icon awesome-bioinformatics

A curated list of awesome Bioinformatics databases, softwares, libraries, toolboxes, pipelines, books, courses, tutorials and more.

awesome-single-cell icon awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bi-be-cs-183-2023 icon bi-be-cs-183-2023

Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023

book icon book

:green_book:ๆˆ‘็š„ไธชไบบไนฆ็ฑๅญฆไน ๅ’Œๆ”ถ่—

books icon books

"ๆˆ‘็š„้˜…ๅŽ†"

capybara icon capybara

Capybara: A computational tool to measure cell identity and fate transitions

cell2location icon cell2location

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

d-ce icon d-ce

An effective landmark free and model free de novo 3D reconstruction method for single cell analysis.

dca icon dca

Deep count autoencoder for denoising scRNA-seq data

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