Rachel Ng's Projects
A cookiecutter template for Snakemake workflows
The iconic SVG, font, and CSS toolkit
Hugo documentation theme as simple as plain book
An example hugo static site with Toha theme.
:red_circle: MiniSom is a minimalistic implementation of the Self Organizing Maps
create sankey diagrams with matplotlib
Varying Parameter Analysis for Systems Biology
Scatter plot with pie chart markers using matplotlib in Python.
Snakemake workflow for running cellphonedb.
A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.
Cookiecutter for snakemake slurm profile
Snakemake pipeline for filtering, lifting over to hg38, and merging WGS gvcf files.