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acml2022-ml4mi

ML4MI Workshop at ACML 2022

bioinfoaps.github.io

This repo has files and instructions for the "Basic Bioinformatics and command-line tools for phytopathologists" organized during Plant Health 2020.

coderelease_colornormalization

This is the MATLAB code for stain separation and color normalization in computational pathology (histopathological images)

deepclustering

Deep Clustering

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

hact-net

histocartography

Histocartography is a framework bringing together AI and Digital Pathology

interpretai_digipath

Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021

ninepins

patho-quant-explainer

Code for replicating results presented in the paper: "Quantifying Explainers of Graph Neural Networks in Computational Pathology"

pushpakpati.github.io

A beautiful, simple, clean, and responsive Jekyll theme for academics

pytorch-tutorial

PyTorch Tutorial for Deep Learning Researchers

pytorch_geometric

Geometric Deep Learning Extension Library for PyTorch

robustness

training-template

Template for instructor training workshop websites.

verifier

zoommil

ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) classification.