Menubar crashes Aquamacs when R buffer is open about poly-r

[vspinu]

Thanks @marc-h38 for the updates. I personally never experienced this, but what you say does make sense. Compiling those menus in poly-R takes time because a sub-process has to be queried and many directories checked. So yes, it can take non-trivial amount of time.

[treese]

This turns out to have been a long-standing bug in the memory management for menus in Aquamacs, still present in the released Emacs 27. Patches for both have been submitted.

The discussion here, and Michael's distillation of how to reproduce it, were very helpful in tracking it down, so thanks very much!

(I'm the current Aquamacs maintainer.)

[vspinu]

Well, crashes are certainly out of polymode's scope. Something is not right with the emacs/aquamacs on your machine. Particularly with easy-menu-define macro. It might have been fixed in the newer emacs versions. Ideally one can open emacs under gdb and them report the binary stacktrace to the emucs bug tracker.

[braunm]

I am able to replicate the issue with GNU Emacs 26.3 (downloaded from emacsformacos.com), so it is not just an Aquamacs 3.5 (based on emacs 25.3) problem. I am able to use the menu bar with other emacs packages (e.g., AucTeX).

To replicate on GNU Emacs, I opened a file with the following contents:

%% -*- poly-noweb+R
some text here

I then launched an R session, and clicked the menu bar. Crash.

Below I pasted the Problem Report generated by the OS after the crash of GNU Emacs. I'm just a "user" reporting a crash that occurs only after loading a newly updated version of poly-R, on two different computers, and two different versions of emacs.

Process:               Emacs-x86_64-10_14 [86409]
Path:                  /Applications/Emacs.app/Contents/MacOS/Emacs-x86_64-10_14
Identifier:            org.gnu.Emacs
Version:               Version 26.3 (9.0)
Code Type:             X86-64 (Native)
Parent Process:        ??? [1]
Responsible:           Emacs-x86_64-10_14 [86409]
User ID:               501

Date/Time:             2019-09-10 11:46:21.096 -0500
OS Version:            Mac OS X 10.14.6 (18G95)
Report Version:        12
Bridge OS Version:     3.6 (16P6571)
Anonymous UUID:        860C53EE-36BE-943F-6133-DBA1B5CBD87E

Sleep/Wake UUID:       7D9626C2-7D2D-459D-8611-5AACF04C97DF

Time Awake Since Boot: 190000 seconds
Time Since Wake:       2100 seconds

System Integrity Protection: enabled

Crashed Thread:        0  Dispatch queue: com.apple.main-thread

Exception Type:        EXC_CRASH (SIGABRT)
Exception Codes:       0x0000000000000000, 0x0000000000000000
Exception Note:        EXC_CORPSE_NOTIFY

Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0   libsystem_kernel.dylib        	0x00007fff7ea812c6 __pthread_kill + 10
1   libsystem_pthread.dylib       	0x00007fff7eb3cbf1 pthread_kill + 284
2   libsystem_c.dylib             	0x00007fff7e99ed8a raise + 26
3   Emacs-x86_64-10_14            	0x00000001000bb789 terminate_due_to_signal + 153
4   Emacs-x86_64-10_14            	0x00000001000d8e03 emacs_abort + 19
5   Emacs-x86_64-10_14            	0x00000001001c102a ns_term_shutdown + 122
6   Emacs-x86_64-10_14            	0x00000001000bb976 shut_down_emacs + 262
7   Emacs-x86_64-10_14            	0x00000001000bb756 terminate_due_to_signal + 102
8   Emacs-x86_64-10_14            	0x00000001000dba0e handle_fatal_signal + 14
9   Emacs-x86_64-10_14            	0x00000001000dba91 deliver_thread_signal + 129
10  Emacs-x86_64-10_14            	0x00000001000da629 deliver_fatal_thread_signal + 9
11  libsystem_platform.dylib      	0x00007fff7eb31b5d _sigtramp + 29
12  ???                           	0x00007fffadbd8018 0 + 140736108265496
13  libsystem_kernel.dylib        	0x00007fff7ea94589 abort_with_reason + 22
14  libobjc.A.dylib               	0x00007fff7d17a8dd _objc_fatalv(unsigned long long, unsigned long long, char const*, __va_list_tag*) + 108
15  libobjc.A.dylib               	0x00007fff7d17a78f _objc_fatal(char const*, ...) + 135
16  libobjc.A.dylib               	0x00007fff7d16d563 (anonymous namespace)::AutoreleasePoolPage::pop(void*) + 941
17  com.apple.CoreFoundation      	0x00007fff529c05ea _CFAutoreleasePoolPop + 22
18  com.apple.Foundation          	0x00007fff54c390e3 -[NSAutoreleasePool release] + 144
19  Emacs-x86_64-10_14            	0x00000001001db235 ns_update_menubar + 2341
20  Emacs-x86_64-10_14            	0x00000001001db27e x_activate_menubar + 14
21  Emacs-x86_64-10_14            	0x00000001000c53c2 read_char + 9634
22  Emacs-x86_64-10_14            	0x0000000100162261 read_filtered_event + 241
23  Emacs-x86_64-10_14            	0x000000010014166b funcall_subr + 299
24  Emacs-x86_64-10_14            	0x0000000100140b18 Ffuncall + 728
25  Emacs-x86_64-10_14            	0x0000000100184d3e exec_byte_code + 1838
26  Emacs-x86_64-10_14            	0x0000000100140ab9 Ffuncall + 633
27  Emacs-x86_64-10_14            	0x0000000100184d3e exec_byte_code + 1838
28  Emacs-x86_64-10_14            	0x0000000100140ab9 Ffuncall + 633
29  Emacs-x86_64-10_14            	0x0000000100139c26 Ffuncall_interactively + 70
30  Emacs-x86_64-10_14            	0x0000000100140b18 Ffuncall + 728
31  Emacs-x86_64-10_14            	0x000000010014066f Fapply + 607
32  Emacs-x86_64-10_14            	0x0000000100139e92 Fcall_interactively + 594
33  Emacs-x86_64-10_14            	0x000000010014166b funcall_subr + 299
34  Emacs-x86_64-10_14            	0x0000000100140b18 Ffuncall + 728
35  Emacs-x86_64-10_14            	0x0000000100184d3e exec_byte_code + 1838
36  Emacs-x86_64-10_14            	0x0000000100140ab9 Ffuncall + 633
37  Emacs-x86_64-10_14            	0x000000010014124c call1 + 44
38  Emacs-x86_64-10_14            	0x00000001000bfb0c command_loop_1 + 1900
39  Emacs-x86_64-10_14            	0x000000010013f16c internal_condition_case + 268
40  Emacs-x86_64-10_14            	0x00000001000cef60 command_loop_2 + 48
41  Emacs-x86_64-10_14            	0x000000010013e760 internal_catch + 272
42  Emacs-x86_64-10_14            	0x00000001000be81e command_loop + 158
43  Emacs-x86_64-10_14            	0x00000001000be72f recursive_edit_1 + 111
44  Emacs-x86_64-10_14            	0x00000001000bea16 Frecursive_edit + 406
45  Emacs-x86_64-10_14            	0x00000001000bd32d main + 6477
46  libdyld.dylib                 	0x00007fff7e9463d5 start + 1

Thread 1:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 2:
0   libsystem_kernel.dylib        	0x00007fff7ea8261a __select + 10
1   Emacs-x86_64-10_14            	0x00000001001c26d8 -[EmacsApp fd_handler:] + 264
2   com.apple.Foundation          	0x00007fff54c47112 __NSThread__start__ + 1194
3   libsystem_pthread.dylib       	0x00007fff7eb3a2eb _pthread_body + 126
4   libsystem_pthread.dylib       	0x00007fff7eb3d249 _pthread_start + 66
5   libsystem_pthread.dylib       	0x00007fff7eb3940d thread_start + 13

Thread 3:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 4:: com.apple.NSEventThread
0   libsystem_kernel.dylib        	0x00007fff7ea7b22a mach_msg_trap + 10
1   libsystem_kernel.dylib        	0x00007fff7ea7b76c mach_msg + 60
2   com.apple.CoreFoundation      	0x00007fff529ee1ee __CFRunLoopServiceMachPort + 328
3   com.apple.CoreFoundation      	0x00007fff529ed75c __CFRunLoopRun + 1612
4   com.apple.CoreFoundation      	0x00007fff529ecebe CFRunLoopRunSpecific + 455
5   com.apple.AppKit              	0x00007fff4ffec4c2 _NSEventThread + 175
6   libsystem_pthread.dylib       	0x00007fff7eb3a2eb _pthread_body + 126
7   libsystem_pthread.dylib       	0x00007fff7eb3d249 _pthread_start + 66
8   libsystem_pthread.dylib       	0x00007fff7eb3940d thread_start + 13

Thread 5:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 6:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 7:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 8:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 9:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 10:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 11:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 12:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 13:
0   libsystem_pthread.dylib       	0x00007fff7eb393f0 start_wqthread + 0

Thread 0 crashed with X86 Thread State (64-bit):
  rax: 0x0000000000000000  rbx: 0x000000011055f5c0  rcx: 0x00007ffeefbfd728  rdx: 0x0000000000000000
  rdi: 0x0000000000000307  rsi: 0x0000000000000006  rbp: 0x00007ffeefbfd760  rsp: 0x00007ffeefbfd728
   r8: 0x0000000000000005   r9: 0x0000000100d0d9a0  r10: 0x0000000000000000  r11: 0x0000000000000287
  r12: 0x0000000000000307  r13: 0x0000000000000000  r14: 0x0000000000000006  r15: 0x000000000000002d
  rip: 0x00007fff7ea812c6  rfl: 0x0000000000000286  cr2: 0x000000010eedd510
  
Logical CPU:     0
Error Code:      0x02000148
Trap Number:     133


Binary Images:
       0x100000000 -        0x10022dff7 +Emacs-x86_64-10_14 (0) <86042E43-9893-3BEC-8F2A-32B74E6698F1> /Applications/Emacs.app/Contents/MacOS/Emacs-x86_64-10_14
       0x10075e000 -        0x1008a7fdf +libgnutls.30.dylib (0) <8AB47B12-07A6-317A-92F0-5FD3E29EA345> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libgnutls.30.dylib
       0x1008f4000 -        0x10099bfff +libp11-kit.0.dylib (0) <16D96976-AE5D-33A7-8C31-7E8879327B1C> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libp11-kit.0.dylib
       0x1009ec000 -        0x100a08fff +libidn2.0.dylib (0) <77F81732-0F0C-3E53-B27F-4E7A63BD0E87> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libidn2.0.dylib
       0x100a11000 -        0x100b75ff7 +libunistring.2.dylib (0) <408256BA-9B3D-3F7D-8B2A-360161D78347> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libunistring.2.dylib
       0x100b8f000 -        0x100b9bff3 +libtasn1.6.dylib (0) <75BB7B83-37D7-30A5-9774-0F23F8B118E9> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libtasn1.6.dylib
       0x100ba4000 -        0x100bc9ff7 +libnettle.6.dylib (0) <FB02BCD2-BB51-357A-9B77-CAAF6F63FC3E> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libnettle.6.dylib
       0x100bd8000 -        0x100c01ffb +libhogweed.4.dylib (0) <514278BB-1338-34FA-B4C2-64BF1BD8C87F> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libhogweed.4.dylib
       0x100c0f000 -        0x100c6afff +libgmp.10.dylib (0) <CA483C4E-6735-346B-B4C0-52E3A2B25DBE> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libgmp.10.dylib
       0x100c7b000 -        0x100c83ffb +libintl.8.dylib (0) <33D745A0-269E-37C7-920F-96FBD0085966> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libintl.8.dylib
       0x100c8c000 -        0x100c90fff +libffi.6.dylib (0) <DB182305-5726-3F68-A78D-E3E69AAD1CE4> /Applications/Emacs.app/Contents/MacOS/lib-x86_64-10_14/libffi.6.dylib
       0x10d900000 -        0x10d903047  libobjc-trampolines.dylib (756.2) <5795A048-3940-3801-90CE-33D1B1AF81F4> /usr/lib/libobjc-trampolines.dylib
       0x1104bd000 -        0x11052770f  dyld (655.1.1) <DFC3C4AF-6F97-3B34-B18D-7DCB23F2A83A> /usr/lib/dyld
    0x7fff47114000 -     0x7fff4746dfff  com.apple.RawCamera.bundle (8.15.0 - 1031.4.4) <AB6E8A8F-0BFE-37EE-A135-44ABA4FCB559> /System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera
    0x7fff47470000 -     0x7fff4757cfff  com.apple.AMDMTLBronzeDriver (2.11.20 - 2.1.1) <1D8E8E3B-88F4-35B1-8E83-AE74B558C26C> /System/Library/Extensions/AMDMTLBronzeDriver.bundle/Contents/MacOS/AMDMTLBronzeDriver
    0x7fff4bf57000 -     0x7fff4c289fff  com.apple.driver.AppleIntelKBLGraphicsMTLDriver (12.10.12 - 12.1.0) <F44A2087-008C-30CB-9E33-A94DFF197E68> /System/Library/Extensions/AppleIntelKBLGraphicsMTLDriver.bundle/Contents/MacOS/AppleIntelKBLGraphicsMTLDriver
    0x7fff4ed96000 -     0x7fff4ed96fff  com.apple.Accelerate (1.11 - Accelerate 1.11) <762942CB-CFC9-3A0C-9645-A56523A06426> /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
    0x7fff4ed97000 -     0x7fff4edadff7  libCGInterfaces.dylib (506.22) <1B6C92D9-F4B8-37BA-9635-94C4A56098CE> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/Libraries/libCGInterfaces.dylib
    0x7fff4edae000 -     0x7fff4f447fef  com.apple.vImage (8.1 - ???) <53FA3611-894E-3158-A654-FBD2F70998FE> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage
    0x7fff4f448000 -     0x7fff4f6c1ff3  libBLAS.dylib (1243.200.4) <417CA0FC-B6CB-3FB3-ACBC-8914E3F62D20> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
    0x7fff4f6c2000 -     0x7fff4f734ffb  libBNNS.dylib (38.250.1) <538D12A2-9B9D-3E22-9896-F90F6E69C06E> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBNNS.dylib
    0x7fff4f735000 -     0x7fff4fadeff3  libLAPACK.dylib (1243.200.4) <92175DF4-863A-3780-909A-A3E5C410F2E9> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
    0x7fff4fadf000 -     0x7fff4faf4feb  libLinearAlgebra.dylib (1243.200.4) <CB671EE6-DEA1-391C-9B2B-AA09A46B4D7A> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLinearAlgebra.dylib
    0x7fff4faf5000 -     0x7fff4fafaff3  libQuadrature.dylib (3.200.2) <1BAE7E22-2862-379F-B334-A3756067730F> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libQuadrature.dylib
    0x7fff4fafb000 -     0x7fff4fb77ff3  libSparse.dylib (79.200.5) <E78B33D3-672A-3C53-B512-D3DDB2E9AC8D> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libSparse.dylib
    0x7fff4fb78000 -     0x7fff4fb8bfe3  libSparseBLAS.dylib (1243.200.4) <E9243341-DB77-37C1-97C5-3DFA00DD70FA> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libSparseBLAS.dylib
    0x7fff4fb8c000 -     0x7fff4fd73ff7  libvDSP.dylib (671.250.4) <7B110627-A9C1-3FB7-A077-0C7741BA25D8> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib
    0x7fff4fd74000 -     0x7fff4fe27ff7  libvMisc.dylib (671.250.4) <D5BA4812-BFFC-3CD0-B382-905CD8555DA6> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvMisc.dylib
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    0x7fff50dd2000 -     0x7fff50e3dfff  com.apple.ApplicationServices.ATS (377 - 453.11.2.2) <A258DA73-114B-3102-A056-4AAAD3CEB9DD> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS
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    0x7fff5152d000 -     0x7fff5152dfff  com.apple.audio.units.AudioUnit (1.14 - 1.14) <ABC54269-002D-310D-9654-46CF960F863E> /System/Library/Frameworks/AudioUnit.framework/Versions/A/AudioUnit
    0x7fff51886000 -     0x7fff51c27fff  com.apple.CFNetwork (978.0.7 - 978.0.7) <B2133D0D-1399-3F17-80F0-313E3A241C89> /System/Library/Frameworks/CFNetwork.framework/Versions/A/CFNetwork
    0x7fff51c41000 -     0x7fff51f38fff  com.apple.HIToolbox (2.1.1 - 918.7) <13F69D4C-D19F-3E09-9231-1978D783A556> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox
    0x7fff51f43000 -     0x7fff51fd8ff3  com.apple.ink.framework (10.9 - 225) <7C7E9483-2E91-3DD3-B1E0-C238F42CA0DD> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink
    0x7fff52016000 -     0x7fff5201cff7  com.apple.speech.recognition.framework (6.0.3 - 6.0.3) <3CC050FB-EBCB-3087-8EA5-F378C8F99217> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SpeechRecognition.framework/Versions/A/SpeechRecognition
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External Modification Summary:
  Calls made by other processes targeting this process:
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    thread_create: 0
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  Calls made by this process:
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    thread_create: 0
    thread_set_state: 0
  Calls made by all processes on this machine:
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    thread_create: 0
    thread_set_state: 0

VM Region Summary:
ReadOnly portion of Libraries: Total=400.8M resident=0K(0%) swapped_out_or_unallocated=400.8M(100%)
Writable regions: Total=212.7M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=212.7M(100%)
 
                                VIRTUAL   REGION 
REGION TYPE                        SIZE    COUNT (non-coalesced) 
===========                     =======  ======= 
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CG backing stores                 1160K        2 
CG image                           460K       34 
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CoreImage                          460K       36 
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Image IO                           304K        1 
Kernel Alloc Once                    8K        1 
MALLOC                           132.8M       49 
MALLOC guard page                   32K        7 
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===========                     =======  ======= 
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Model: MacBookPro15,1, BootROM 220.270.99.0.0 (iBridge: 16.16.6571.0.0,0), 6 processors, Intel Core i7, 2.6 GHz, 16 GB, SMC 
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AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x7BF), wl0: Mar 28 2019 19:17:52 version 9.137.9.0.32.6.34 FWID 01-36f56c94
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Thunderbolt Bus: MacBook Pro, Apple Inc., 42.1
Thunderbolt Bus: MacBook Pro, Apple Inc., 42.1

[vspinu]

Can you replicate it from plain r-mode buffers? That menu appears in ess mode as well.

Can you trigger the crash by executing (ess-get-next-available-process "R" t) or (poly-r-rmarkdown-templates-menu) ?

It's something low level and surely OS/window manager specific. I would be happy to add a work around but as I cannot reproduce I am afraid your are alone here. The GNU bug tracker is the right place for this really.

[braunm]

I can now replicate it without any buffers at all. For GNU Emacs 26.3, running with no configurations at all:

From Terminal:

  cd /Applications/Emacs.app/Contents/MacOS
     ./Emacs -Q

Then, in Emacs:

M-: (require 'package)
M-x package-initialize
M-: (require 'poly-R)
M-x R
<click on menu bar>
Crash!

After launching the R session, I evaluated the two expressions you suggested. (ess-get-next-available-process "R" t) returned nil. (poly-r-rmarkdown-templates-menu) returned the following in the Messages buffer:

(("rmarkdown" ["GitHub Document (Markdown)" (poly-r--rmarkdown-draft "rmarkdown" "github_document") :help "Template for documents to be published as GitHub Flavored Markdown.
"] ["Package Vignette (HTML)" (poly-r--rmarkdown-draft "rmarkdown" "html_vignette") :help "Template for package vignettes. This customises the basic HTML output to take up as little space as possible.
"]))

In either case, I would still get a crash after clicking on the menu bar. Because I launched emacs from the Terminal window, I get the following output there after the crash:

2019-09-10 16:10:44.624 Emacs-x86_64-10_14[8824:196256] Failed to initialize color list unarchiver: Error Domain=NSCocoaErrorDomain Code=4864 "*** -[NSKeyedUnarchiver_initForReadingFromData:error:throwLegacyExceptions:]: non-keyed archive cannot be decoded by NSKeyedUnarchiver" UserInfo={NSDebugDescription=*** -[NSKeyedUnarchiver_initForReadingFromData:error:throwLegacyExceptions:]: non-keyed archive cannot be decoded by NSKeyedUnarchiver}
objc[8824]: Invalid or prematurely-freed autorelease pool 0x1010081d0.
Fatal error 6: Abort trapAbort trap: 6

Removing the offending lines in poly-R.el would be a useful workaround, but at this point, it matters to me only if I update the package again.

I see your point about this being a lower-level GNU Emacs thing, but I'm going to try the ESS list next. The crash appears to occur only with R. I tried after launching a bash shell and a python session, and had no problems. If there is no solution there, I'll move up to the Emacs list.

Are there any other packages, other than poly-R, that you know use easy-menu-define in a way that would trigger the same kind of crash?

In any case, thanks for your help with the debugging.

[vspinu]

I think a lot of packages do use easy menu define. I will cross check if I use it incorrectly somehow.

Back to my previous question. Do you see the crash from *R* buffer when you click on R-Markdown menu? Or it only happens from the polymode buffers?

[braunm]

I just checked using a basic Emacs 26.3 instance with no configurations, as above. It appears that if the active buffer is either the R session, or a buffer in ess-R mode, there is a crash. But if, say, there is an R session open, but the cursor is in a tex file, there is no crash.

I reported the issue to ess-bugs, and a respondent was able to replicate the problem.

The crash occurs if I click on any menu item at the top of the screen (File, Edit, etc.).

[vspinu]

It's most surely Mac OS issue. Let's try to narrow it down.

Can you just redefine poly-r-rmarkdown-templates-menu like this and try again:

(defun poly-r-rmarkdown-templates-menu (&optional _items)
  '(("rmarkdown" ["GitHub Document (Markdown)" (poly-r--rmarkdown-draft "rmarkdown" "github_document") :help "Template for documents to be published as GitHub Flavored Markdown.
"] ["Package Vignette (HTML)" (poly-r--rmarkdown-draft "rmarkdown" "html_vignette") :help "Template for package vignettes. This customises the basic HTML output to take up as little space as possible.
"])))

If it doesn't crash that means it has something to do with calling a process from the menu.

Would it be possible for you to pull emacs source and compile emacs 27. Just to be sure that this thing hasn't been fixed on the emacs side already?

[braunm]

The crash no longer happens after redefining poly-r-rmarkdown-templates-menu.
I downloaded a precompiled nightly build of Emacs 27.0.50, but could not get any packages to load at all.

[vspinu]

You just need to clone poly-R and from the comand line:

export EMACS=emacs27
make start

this will start emacs 27 with all polymode and ESS dependencies installed from scratch.

Replace emacs27 with whatever binary you want to try with.

[braunm]

Here's what I did from the cloned poly-R directory:

export EMACS=/Applications/Emacs.app/Contents/MacOS/Emacs
make start

This launched the GUI for emacs 27.0.50. Then, in Emacs:

<click on menubar with cursor in scratch buffer>
No problem!
M-x R
<click on menubar with cursor in scratch buffer>
No problem!
<click on menubar with cursor in R buffer>
Crash!

[mirkhosro]

I'm also affected by this issue. When I disable poly-R by commenting out (require 'poly-R) from my init file crashes stop happening. I'm using Emacs 26.3 on MacOS 10.15.2, or to be more exact GNU Emacs 26.3 (build 1, x86_64-apple-darwin18.2.0, NS appkit-1671.20 Version 10.14.3 (Build 18D109)) installed by brew cask

[marc-h38]

It's not specific to R.
https://www.google.com/search?q=macos+emacs+click+menubar+crash
For me tramp seems to be triggering it. I'm on 10.14.6, emacs 26.1 is fine but 26.2 and 26.3 crash systematically like this.

[marc-h38]

After some more investigation I just detailed in Tramp bug https://debbugs.gnu.org/cgi/bugreport.cgi?bug=24472 I suspect rendering the menu takes too long, a macOS timeout cancels that rendering and frees up something in the NSAutoreleasePool that Emacs tries to release a second time as described by Alan Third in 24472.

I know absolutely nothing about poly-R but the workaround(s) listed above all feel like running less code (i.e.: in a shorter time) when the user tries to click on the menu. Confirm? Does artificially increasing that time make the crash more likely?

[marc-h38]

I root caused the similar issue with tramp (see 24472 above) and found a simple and pretty good workaround:

   (define-key global-map [menu-bar file revert-buffer] nil)

This stops tramp from accessing the network when reaching the menu bar and the corresponding crashes are gone on my system.

The key lead for 24472 was to notice the time-consuming network activity. Again I don't know anything about Poly-R but IMHO you should first attempt to track down and nip every time-consuming activity happening when accessing the menubar. It feels just wrong.