Harry Carey's Projects
Download Allen mouse datasets and format them for use in QuickNII
🐜🐀🐒🚶 A full system for robust 3D markerless tracking
A lightweight python module to interact with atlases for systems neuroscience
brainglobe.info website
a python based software for visualization of neuroanatomical and morphological data.
Do you have a dataset of xyz neuron coordinates within allen brain space? With this tool you can find exactly which brain region each xyz point lies in.
My repo to clone into for data
A compositor for X11.
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals
A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
A repository for weights files related to DeepSlice
A tool for drawing ROIs on videos and analysing deeplabcut videos.
Various scripts to support deeplabcut...
2D sections to 3D atlas registration with Fiji and QuPath
Interactive filtering of predicted ligands
SponsorBlock client for all YouTube TV clients.
Keras implementation of CoordConv for all Convolution layers
WebGL-based viewer for volumetric data
a series of notebooks for the analysis of Fiber Photometry
Use your computer keyboard as a "piano".