Comments (3)
Hi,
Sorry for the late reply. Your cohort is too big to visualize and hence the grids get too small.
You need to save the plot to a pdf with enough width and height to see the details. Set removeNonMutated = TRUE
to exclude..
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Related Issues (20)
- when adding cntable to maf tools object, if no mutations in gene the Start_Position End_Position are blank leading to errors HOT 5
- Extracting VAF information apart from plot. HOT 4
- Running trinucleotideMatrix generates Error in.Call2 HOT 11
- Getting error in lollipop plot HOT 3
- Signature plot HOT 11
- TMB plot (tcgaCompare): Burden changes depending on input order HOT 3
- Different aa.lengths in lollipopPlot() and lollipopPlot2() HOT 2
- lollipopPlot()Report an error:Error in .getdomains(geneID = gene, refSeqID = refSeqID, proteinID = proteinID) : Structure for protein PPDPFL not found. HOT 1
- The get_col_df function seems to have a bug in the 6th line HOT 3
- Error in if (dist <= mergeDist) { : missing value where TRUE/FALSE needed HOT 2
- sampleSwaps.R: add an error message in case of missing index files HOT 6
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- Questions about MATH score HOT 1
- Error in get_lp_data(maf = m1, geneID = gene, AACol = AACol1, refSeqID = refSeqID, : Structure for protein BAGE3 not found. HOT 1
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