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Paul O. Lewis's Projects

arbor icon arbor

Program implementing the grape method for estimating the marginal likelihood for phylogenetic models

dendropy icon dendropy

A Python library for phylogenetic scripting, simulation, data processing and manipulation.

galax icon galax

Software to estimate topological information content from a phylogenetic posterior MCMC sample

lorad icon lorad

Software for estimating marginal likelihoods for phylogenetic models using the HPD histogram method

loradml icon loradml

Estimates marginal likelihood from a parameter sample using the LoRaD method.

phycas icon phycas

Software for Bayesian phylogenetic analysis

plewis.github.io icon plewis.github.io

Web site for Paul O. Lewis (Ecology and Evolutionary Biology, University of Connecticut)

strom icon strom

Repository for C++ phylogenetics tutorial

td icon td

Calculates KF tree distance between a reference tree and one or more other trees

termite-battle icon termite-battle

Bayesian version of the Adams and Mesterton-Gibbons (2003. Behavioral Ecology 14:719-723) ant battle model

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