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open Graph Image
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name
kiteomoru/deconvolution-analysis-of-mouse-liver-cell-types
name
spring-projects/spring-boot
is In Organization
No
is In Organization
Yes
description
This project involves the Deconvolution (Digital flow-cytometry) of mice whole liver. ScRNA-Seq analysis was performed using Seurat R package, RNA-Seq pipeline was performed with HISAT2 (Alignment), HTSEQ (read count). Data normalization was performed, and the data was uploaded to CIBERSORTx to perform deconvolution analysis to identify the differences in cell type fractions between healthy samples and samples with Non-alcoholic Steatohepatitis (NASH).
description
Spring Boot
homepage
homepage
https://spring.io/projects/spring-boot
url
https://githubhelp/kiteomoru/deconvolution-analysis-of-mouse-liver-cell-types
url
https://githubhelp/spring-projects/spring-boot
disk Usage
12
dis kUsage
173883
stargazer Count
2
stargazer Count
73505
forkCount
0
forkCount
40301
watcher Count
1
watcher Count
73505
created At
2022-08-02
created At
2012-10-19
license Info
license Info
Apache License 2.0
issues
0
issues
50
languages
1
languages
13
repository Topics
5
repository Topics
4
owner
kiteomoru
owner
spring-projects
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owner Avatar
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other
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