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followers: 86.0 following: 2.0 repos: 89.0 gists: 3.0

Name: Pierre Poulain

Type: User

Twitter: pierrepo

Location: Paris, France

Pierre Poulain, associate professor

I am associate professor at Université Paris Cité, France. I currently perform my research at the Laboratory of Theoretical Biochemistry. I study the sharing and reuse of molecular dynamics simulation data and code. For this, I develop new methods and software, mostly in Python, using traditional machine learning technics or deep learning. More generally, I have a strong interest in data analysis and data management in biology and bioinformatics.

Projects

Bayesian clustering

Jupyter-based platform for e-learning

Have a look to the Plasma project website.

Structural bioinformatics

Misc

Pierre Poulain's Projects

2019-04-15-elixir-france-python

Binder repo for Elixir-IFB-IJM Software Carpentry workshop - Paris - 2019-04-15/16

admin

Touts les notes de réunion, la charte de travail et tous les détails sur Fongwama

autoclassweb

AutoClassWeb: a simple web interface for Bayesian clustering of omics data :package: :rocket:

autoclassweb-app

Deployment for AutoClassWeb as a local app

autoclassweb-server

Deployment for AutoClassWeb as a web server

autoclasswrapper

AutoClassWrapper: a Python :snake: wrapper for AutoClass C classification :package: :rocket:

autoclasswrapper-demo

backup-twitter

Backup Twitter timeline in sqlite database

benford-law

bibliomarklets

Des bookmarklets pour faciliter l'accès aux articles scientifiques payants via les proxys institutionnels :bookmark:

bioinformatics-software

👨‍💻🧬 Trends in Bioinformatics Software Development 💻📈

biopyassistant

buildh

:computer: Build hydrogens from a united-atom MD of lipids and calculate the order parameter.

cheat

cheat allows you to create and view interactive cheatsheets on the command-line. It was designed to help remind *nix system administrators of options for commands that they use frequently, but not frequently enough to remember.