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bonnie

Clinical Quality Measure Testing Tool

bph-use-case

Artifacts for the eMERGE benign prostatic hyperplasia (BPH) phenotype implemented in PhEMA

clinical_quality_language

Clinical Quality Language (CQL) is an HL7 specification for the expression of clinical knowledge that can be used within both the Clinical Decision Support (CDS) and Clinical Quality Measurement (CQM) domains. This repository contains complementary tooling in support of that specification.

cqf-ruler

CQL Measure Processing Component

cql-on-omop

Runs CQL phenotype definitions against an OMOP repository

cql-testing-framework

AHRQ-CDS CQL Testing Framework to allow CQL authors to more easily develop and run test cases for validating CQL-based CDS logic, regardless of how that CQL was developed (e.g., by hand, in the AT, etc). This is intended to be a developer-facing tool, run on the command-line; it has no server components.

cql_engine

Clinical Quality Language Evaluation Engine

cql_execution_service

Clinical Quality Language Execution Service

cts2-vsd-service

deployments

Kubernetes cluster configs to use with Flux.

der

REST services over a data element repository

elm-utils

Some tools for working with ELM libraries.

em2ikn

new

flux-get-started

Getting started with Flux and the Helm Operator

health-data-standards

heart-failure-use-case

Artifacts for the PhEMA heart failure use case phenotype

hqmf2js

Library to convert HQMF to JavaScript

ohdsi-atlas

ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

ohdsi-json-schema-generator

ohdsi-webapi

OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications

omoponfhir-extractor

Tool for extracting OMOP data as FHIR resource using OMOP on FHIR.

omoponfhir-main

Main OMOPonFHIR Settings

omoponfhir-omopv5-jpabase

OMOPv5 JPABase to support OMOPonFHIR

omoponfhir-omopv5-stu3-mapping

OMOPonFHIR Mapping Between OMOPv5 and STU3

omoponfhir-stu3-server

OMOPonFHIR STU3 Server

phekb-export

PheKB data exporter and viewer

phekb-phenotypes

A selection of PheKB phenotypes represented using CQL and FHIR.

phema-author

PhEMA Authoring Tool

phema-executer

phema-execution-ui