petrelharp Goto Github PK
Name: Peter Ralph
Type: User
Company: University of Oregon
Peter Ralph's Projects
ftprime_ms
fwdpy11_arg_example
Example of tracking the ARG during forward simulations. Implementation is a Python package using fwdpp, fwdpy11, msprime, and pybind11.
gene-flow-inference
howmanybears
ie2-jan-2024
inherits_from
interpolation_methods
isolation_by_coalescence
ist-oct-2020
Talk at IST's EvoLunch, October 2020
kalman_walk
kastore
The key-array store for read-only numerical data.
landscape_geometry
investigations of how real landscape geometries affect adaptation
landscape_msprime
landsim
efficient, forwards-time simulation of populations on raster-based landscapes
latexml
LaTeXML is a TeX and LaTeX to XML translator.
lineage_plotting
linear-sde-lyapunov
R code to find by simulation Lyapunov exponents for linear SDE.
local_pca
Methods for examining PCA locally along the genome.
lostruct-py
madison-sept-2018
math578b
course material for Computational Molecular Biology
moscow_2019
msarg
tools to use R to create coalescent simulation scenarios on grids using ms
msprime
A reimplementation of Hudson's classical ms simulator for modern data sets.
msprime-1.0-paper
Publication describing msprime 1.0
nebria
num_edges
nw_prob_2019
osu-may-2021
popassembly
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