pengsihua2023 Goto Github PK

agent-studio

An open toolkit for building and benchmarking general virtual agents in the wild

alphafold

Open source code for AlphaFold.

alphamissense

bert

TensorFlow code and pre-trained models for BERT

bindppi

biobert

Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining

bitfit

Simple Parameter-efficient Fine-tuning for Transformer-based Masked Language-models

convergent_rbd_evolution

covfit

A protein language model for learning the SARS-CoV-2 fitness landscape

deep-learning

deepimmuno

Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity

deepmrnaloc

deepsequence

A generative latent variable model for biological sequence families.

deepspeed

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

deepspeed-ddp

distance-calculation

dnabert

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

english-learning

english-level-up-tips

An advanced guide to learn English which might benefit you a lot 🎉 . 离谱的英语学习指南/英语学习教程。

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

esm3

essay

eve

Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

evescape

Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"

flu_h5_american-wigeon_south-carolina_2021-h5n1_dms

Deep mutational scanning of H5 VEP

geneformer

genslm

GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics

geography

gpt-neox

An implementation of model parallel autoregressive transformers on GPUs, based on the DeepSpeed library.

gradient-accumulation