Parashar's Projects
A visual analysis of scRNA-Seq data
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
demo repo
cellradar
Backend server for CellRadar
Testing Github for BIMM05
Linux kernel source tree
Python library to perform memory efficient cross-sample cell mapping using single cell transciptomics (scRNA-Seq) data
Scheduler for launching jobs on multiple connected machines
Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space
Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.
Tutorials and workflows for single-cell genomics data analysis using Scarf
Material for worskhop series: 'Current topics in bioinformatics' in Lund Stem Cell Center. Organised by Research School in Stem Cell Biology & StemTherapy Bioinformatics Core Facility.
Swift Neighbor Embedding of Sparse Stochastic Graphs
Uniform Manifold Approximation and Projection