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afq

Automated Fiber Quantification

afq-notebooks

along-tract-stats

A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.

apss-tractography

Pipeline for processing diffusion MRI and recostruncting deterministic tractography according to the requirement of the Neurosurgery Department of APSS Trentino.

assignment_problem

blindness-detection-diabetic-retinopathy-

This is a 5 Class Image Classification Task based on a Kaggle dataset from Eye Images (Aravind Eye hospital) - APTOS 2019 Challenge. The goal is to predict the Blindness Stage (0-4) class from the Eye retina Image using Deep Learning Models (CNN). This Automated System would speed up Blindness detection on Patients

code

cvxpy

A Python-embedded modeling language for convex optimization problems.

diabetic-retinopathy-detection

Diagnosing Diabetic Retinopathy from retinal images using SVM's

diffantom

A whole-brain diffusion phantom using phantomas

dipy-dti

dipy-sfm

experiments

Tools for running experiments on a cluster

fastapproximateqap

Fast Approximate Quadratic Assignment for (Brain) Graph Matching

fastpfp

Implementation of the fastPFP approximate subgraph matching algorithm, as described in http://arxiv.org/abs/1207.1114

febrl

Fork of the febrl project http://sourceforge.net/projects/febrl/

fgm

Factorized Graph Matching for CVPR 2012, CVPR 2013

fos

Fos is a 3D engine in Python and OpenGL which concentrates on scientific visualization

gap

Generalized Assignment Problem Solver

hcp-tractography

Dipy pipeline for reconstruction and tracking of tractography from Human Connectome Project dataset

hyperopt

Distributed Asynchronous Hyperparameter Optimization in Python

hyperopt-sklearn

Hyper-parameter optimization for sklearn

kappa-stats

A little Python script to generate Cohen's Kappa and Weighted Kappa measures for inter-rater reliability

life

MatLab routines for evaluating the quality of white-matter connectomes generated using diffusion-weighted imaging.

life_scripts

Diffusion imaging and tractograpy script sin MatLab

mapping_for_subsampling

mapping_for_subsampling_with_disimilarity

matgraphstat

matlab code for various statistical procedures on large graphs

meta_didaktoriko

miccai_experiment_real_data