nordhuang Goto Github PK

afterqc

Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data

bamsurgeon

tools for adding mutations to existing .bam files, used for testing mutation callers

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bcftools

This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib

cnvkit

Copy number variant detection from targeted DNA sequencing

cnvrdfortagsnps

Automatically exported from code.google.com/p/cnvrdfortagsnps

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

ctdna_papers

papers collections of cancer detected from plasma

d3

A JavaScript visualization library for HTML and SVG.

delly

DELLY: Structural variant discovery by integrated paired-end and split-read analysis

duplex-sequencing

echarts

A powerful, interactive charting and visualization library for browser

enar2016

Introduction to High Throughput Data Analysis Using R / Bioconductor

fastqpaper

I collect public fastq records in peer papers

focuscancer

focus the papers of cancer

focusflask

focusmath

focusngs

focus the papers of NGS

folly

Folly is an open-source C++ library developed and used at Facebook.

freevpn

免费的商业级 VPN 服务

ggplot2

code for book <<ggplot2 Elegant Graphics for Data Analysis>>

gitskills

假设我们从零开发，那么最好的方式是先创建远程库，然后，从远程库克隆。

gitskills2

groundhog

Library for implementing RNNs with Theano

hao

好东西传送门

hapcut

hapcut program and related tools

htslib

C library for high-throughput sequencing data formats

isl

Student Sourced Solution Manual for "An Introduction to Statistical Learning: with Applications in R"

islr_labs

<<An Introduction to Statistical Learning with Applications in R>> lab codes

jieba

结巴中文分词